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A proposed update of African swine fever virus (genotype II) subgenotyping based on the central variable region (CVR) of Russian isolatesстатья
Информация о цитировании статьи получена из
Scopus
Статья опубликована в журнале из списка Web of Science и/или Scopus
Дата последнего поиска статьи во внешних источниках: 24 июля 2024 г.
- Авторы: Chernyshev Roman, Igolkin Alexey, van Schalkwyk Antoinette, Zinyakov Nikolay, Kolbin Ivan, Shotin Andrey, Korennoy Fedor, Sprygin Alexander, Mazloum Ali
- Журнал: Archives of Virology
- Том: 169
- Номер: 7
- Год издания: 2024
- Издательство: Springer Verlag
- Местоположение издательства: Germany
- Номер статьи: 147
- DOI: 10.1007/s00705-024-06064-w
- Аннотация: African swine fever virus (ASFV) isolates are grouped and tracked through analysis of their central variable region (CVR) sequences. In this study, sequences of 70 ASFV isolates collected from different regions of Russia between 2018 and 2022 were analyzed. The analysis based on the CVR sequences indicated that the isolates belonged to three distinct groups. Group 1 shared 100% sequence identity to the isolate Georgia 2007/1. Group 5 had a C > A single-nucleotide polymorphism (SNP) at position 601, while group 13 is new and unique to the Far East of Russia, with five isolates from the Amur, Khabarovsk, and Primorsky regions. These findings demonstrate a new approach to phylogenomics and cladistics of ASFV isolates within genotype II on the basis of the CVR.
- Добавил в систему: Коренной Фёдор Игоревич